KEGG   Gallus gallus (chicken): 396240
Entry
396240            CDS       T01006                                 
Symbol
CAPN11
Name
(RefSeq) calpain-1 catalytic subunit
  KO
K01367  calpain-1 [EC:3.4.22.52]
Organism
gga  Gallus gallus (chicken)
Pathway
gga04141  Protein processing in endoplasmic reticulum
gga04210  Apoptosis
gga04217  Necroptosis
gga04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:gga00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    396240 (CAPN11)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    396240 (CAPN11)
   04217 Necroptosis
    396240 (CAPN11)
   04218 Cellular senescence
    396240 (CAPN11)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:gga01002]
    396240 (CAPN11)
Enzymes [BR:gga01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.52  calpain-1
     396240 (CAPN11)
Peptidases and inhibitors [BR:gga01002]
 Cysteine peptidases
  Family C2: calpain family
   396240 (CAPN11)
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III EF-hand_6 EF-hand_1
Other DBs
NCBI-GeneID: 396240
NCBI-ProteinID: NP_990634
CGNC: 54348
Ensembl: ENSGALG00000010186
UniProt: P00789
Position
3:complement(30442440..30454532)
AA seq 705 aa
MMPFGGIAARLQRDRLRAEGVGEHNNAVKYLNQDYEALKQECIESGTLFRDPQFPAGPTA
LGFKELGPYSSKTRGVEWKRPSELVDDPQFIVGGATRTDICQGALGDCWLLAAIGSLTLN
EELLHRVVPHGQSFQEDYAGIFHFQIWQFGEWVDVVVDDLLPTKDGELLFVHSAECTEFW
SALLEKAYAKLNGCYESLSGGSTTEGFEDFTGGVAEMYDLKRAPRNMGHIIRKALERGSL
LGCSIDITSAFDMEAVTFKKLVKGHAYSVTAFKDVNYRGQQEQLIRIRNPWGQVEWTGAW
SDGSSEWDNIDPSDREELQLKMEDGEFWMSFRDFMREFSRLEICNLTPDALTKDELSRWH
TQVFEGTWRRGSTAGGCRNNPATFWINPQFKIKLLEEDDDPGDDEVACSFLVALMQKHRR
RERRVGGDMHTIGFAVYEVPEEAQGSQNVHLKKDFFLRNQSRARSETFINLREVSNQIRL
PPGEYIVVPSTFEPHKEADFILRVFTEKQSDTAELDEEISADLADEEEITEDDIEDGFKN
MFQQLAGEDMEISVFELKTILNRVIARHKDLKTDGFSLDSCRNMVNLMDKDGSARLGLVE
FQILWNKIRSWLTIFRQYDLDKSGTMSSYEMRMALESAGFKLNNKLHQVVVARYADAETG
VDFDNFVCCLVKLETMFRFFHSMDRDGTGTAVMNLAEWLLLTMCG
NT seq 2118 nt   +upstreamnt  +downstreamnt
atgatgccctttggggggatcgctgcccggctgcagagggaccgcctgagagccgagggg
gtcggcgagcacaacaacgctgtcaagtacctcaaccaggactatgaagccctcaagcaa
gagtgcatcgagagtggcaccctcttcagggacccccagttcccagctggccccactgcc
ctcggcttcaaggagctggggccatactccagcaagacacggggcgtggagtggaagcgt
ccatcggaattagtggatgaccctcagttcatcgttggtggtgcaacccggacagatatc
tgccaaggagctctgggtgactgctggctgctggctgccatcggctccctcactctcaac
gaggaactcctgcaccgtgtggtgccccacgggcagagcttccaggaggactacgctggc
atcttccacttccagatctggcagtttggtgaatgggtggatgtggtggtggacgacctg
ctgcccaccaaggacggggagctcctgtttgtgcattcagcagagtgcacagagttctgg
agtgctctgctggagaaggcttacgccaagctgaacggctgctacgagtcgctctcaggg
ggcagcaccactgagggctttgaggatttcaccggcggcgtagcggagatgtatgacctc
aagcgggcaccgcgcaacatgggccacatcatccgcaaggcactggagagggggtccctg
ctgggctgctccatcgacatcacaagtgcctttgatatggaagcagtgaccttcaagaag
ctggtgaaaggccatgcctattctgtcaccgccttcaaagatgtgaactaccggggtcag
caggaacagctcatccgtatcagaaacccctggggtcaggtggagtggactggagcctgg
agcgatggttcttccgagtgggacaacattgaccccagcgacagagaagagctgcaactg
aagatggaggatggagagttttggatgtctttccgggacttcatgagggagttctccagg
ctggagatctgcaacctaacccccgatgccctcaccaaagatgagctcagcaggtggcac
acacaggtgttcgagggcacatggcgccgagggagcactgctgggggctgcaggaacaac
ccagccacattctggatcaatccccagtttaagatcaagctgctggaagaggatgatgac
cctggggatgacgaggtggcttgcagcttcttggtggccctgatgcagaagcaccgtagg
agggagcggcgagtagggggcgacatgcataccatcggcttcgctgtctacgaggttcct
gaggaggcccagggaagccagaatgtgcacttgaagaaggacttcttcctgcgaaaccag
tcgcgggcacgctctgagaccttcatcaacttgagggaagtgagcaaccagatccggctg
ccccctggcgagtacatcgttgtgccctccacctttgagccacacaaggaggccgacttc
atactgcgggtcttcaccgagaagcagtcagacacagcggagctggatgaggagatctcg
gcagacctggcagatgaggaagaaataaccgaggacgacattgaggatggtttcaagaac
atgttccagcagctggcaggggaggacatggaaatcagcgtcttcgagctcaagacgatt
ctgaacagagtgatcgccagacacaaagatctgaagacggatggcttcagtctggactcc
tgccgcaacatggtcaacctgatggataaagatggcagtgcccgcctggggctggtggag
ttccagatcctatggaacaagatccgcagctggctgacaatcttccgccagtatgacctg
gataaatcaggcaccatgagctcatacgagatgcgcatggctctagagtcagctggtttc
aagctgaataacaagctgcatcaggtggtggttgcccgttacgcagatgctgagacgggc
gtggacttcgacaactttgtctgctgcctggtgaagctggagacaatgttcaggttcttc
cacagcatggatcgtgatggcactggaaccgctgtcatgaatctcgctgagtggctgctg
ctgacaatgtgcggctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (10)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (8)   
DNA sequence (16)   
   RefSeq(nuc) (8)   
   GenBank (4)   
   EMBL (4)   
Protein domain (4)   
   Pfam (4)   
All databases (50)   

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